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    LOC104708407 transcription factor TGA2 [ Camelina sativa (false flax) ]

    Gene ID: 104708407, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC104708407
    Gene description
    transcription factor TGA2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelina sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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    Genomic context

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    See LOC104708407 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Cs (GCF_000633955.1) 8 NC_025692.1 (24653764..24657048, complement)

    Chromosome 8 - NC_025692.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104708406 Neighboring gene uncharacterized LOC104708409 Neighboring gene transcription factor TGA5-like Neighboring gene probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 Neighboring gene uncharacterized LOC104708410 Neighboring gene uncharacterized LOC104709899

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_025692.1 Chromosome 8 Reference Cs

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor TGA2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cs

    Genomic

    1. NC_025692.1 Reference Cs

      Range
      24653764..24657048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010424968.2 → XP_010423270.1  transcription factor TGA2

      See identical proteins and their annotated locations for XP_010423270.1

      Conserved Domains (3) summary
      cd14686
      Location:47 → 98
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:128 → 204
      DOG1; Seed dormancy control
      cl21462
      Location:46 → 98
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    2. XM_010424969.2 → XP_010423271.1  transcription factor TGA2

      See identical proteins and their annotated locations for XP_010423271.1

      Conserved Domains (3) summary
      cd14686
      Location:47 → 98
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:128 → 204
      DOG1; Seed dormancy control
      cl21462
      Location:46 → 98
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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