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    LOC101253925 uncharacterized LOC101253925 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101253925, updated on 6-Oct-2023

    Summary

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    Gene symbol
    LOC101253925
    Gene description
    uncharacterized LOC101253925
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 9 NC_015446.3 (5644022..5651159, complement)
    102 previous assembly SL2.50 (GCF_000188115.3) 9 NC_015446.2 (5643783..5650927, complement)

    Chromosome 9 - NC_015446.3Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase-binding protein 1 Neighboring gene uncharacterized protein Neighboring gene pentatricopeptide repeat-containing protein Neighboring gene uncharacterized LOC101253615

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC101253925

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015446.3 Reference SL3.0 Primary Assembly

      Range
      5644022..5651159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010327497.3 → XP_010325799.1  uncharacterized protein LOC101253925

      See identical proteins and their annotated locations for XP_010325799.1

      UniProtKB/TrEMBL
      A0A3Q7HZ28
      Conserved Domains (2) summary
      pfam01448
      Location:245 → 291
      ELM2; ELM2 domain
      cl21498
      Location:353 → 397
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

    2. XM_004246293.4 → XP_004246341.1  uncharacterized protein LOC101253925

      See identical proteins and their annotated locations for XP_004246341.1

      UniProtKB/TrEMBL
      A0A3Q7HZ28
      Conserved Domains (2) summary
      pfam01448
      Location:245 → 291
      ELM2; ELM2 domain
      cl21498
      Location:353 → 397
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    Nucleotide Protein
    Heading Accession and Version

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