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    LOC101257965 mediator of RNA polymerase II transcription subunit 23 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101257965, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101257965
    Gene description
    mediator of RNA polymerase II transcription subunit 23
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 5 NC_015442.3 (16798887..16848447, complement)
    102 previous assembly SL2.50 (GCF_000188115.3) 5 NC_015442.2 (16792318..16841799, complement)

    Chromosome 5 - NC_015442.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109120268 Neighboring gene casein kinase 1-like protein 2 Neighboring gene uncharacterized LOC101259156 Neighboring gene nudix hydrolase 10-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mediator of RNA polymerase II transcription subunit 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015442.3 Reference SL3.0 Primary Assembly

      Range
      16798887..16848447 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010322740.3 → XP_010321042.1  mediator of RNA polymerase II transcription subunit 23

      UniProtKB/TrEMBL
      A0A3Q7HAQ8
      Conserved Domains (1) summary
      pfam11573
      Location:707 → 1321
      Med23; Mediator complex subunit 23

    RNA

    1. XR_002027831.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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