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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference SL3.0 Primary Assembly
Genomic
-
NC_015441.3 Reference SL3.0 Primary Assembly
- Range
-
54993719..55000710
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_010321417.3 → XP_010319719.1 putative E3 ubiquitin-protein ligase LIN-1 isoform X3
- UniProtKB/TrEMBL
-
A0A3Q7GY31
- Conserved Domains (5) summary
-
- smart00504
Location:505 → 569
- Ubox; Modified RING finger domain
- COG2319
Location:1212 → 1481
- WD40; WD40 repeat [General function prediction only]
- cd00020
Location:826 → 927
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- sd00039
Location:1245 → 1319
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1199 → 1479
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_010321415.3 → XP_010319717.1 putative E3 ubiquitin-protein ligase LIN-1 isoform X1
See identical proteins and their annotated locations for XP_010319717.1
- UniProtKB/TrEMBL
-
A0A3Q7GY31
- Conserved Domains (5) summary
-
- smart00504
Location:507 → 571
- Ubox; Modified RING finger domain
- COG2319
Location:1214 → 1483
- WD40; WD40 repeat [General function prediction only]
- cd00020
Location:828 → 929
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- sd00039
Location:1247 → 1321
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1201 → 1481
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_010321416.3 → XP_010319718.1 putative E3 ubiquitin-protein ligase LIN-1 isoform X2
- UniProtKB/TrEMBL
-
A0A3Q7GY31
- Conserved Domains (5) summary
-
- smart00504
Location:506 → 570
- Ubox; Modified RING finger domain
- COG2319
Location:1213 → 1482
- WD40; WD40 repeat [General function prediction only]
- cd00020
Location:827 → 928
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- sd00039
Location:1246 → 1320
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1200 → 1480
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_010321414.3 → XP_010319716.1 putative E3 ubiquitin-protein ligase LIN-1 isoform X1
See identical proteins and their annotated locations for XP_010319716.1
- UniProtKB/TrEMBL
-
A0A3Q7GY31
- Conserved Domains (5) summary
-
- smart00504
Location:507 → 571
- Ubox; Modified RING finger domain
- COG2319
Location:1214 → 1483
- WD40; WD40 repeat [General function prediction only]
- cd00020
Location:828 → 929
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- sd00039
Location:1247 → 1321
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1201 → 1481
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...