U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC101265211 U-box domain-containing protein 35-like [ Solanum lycopersicum (tomato) ]

    Gene ID: 101265211, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101265211
    Gene description
    U-box domain-containing protein 35-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101265211 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 3 NC_015440.3 (56165473..56172715)
    102 previous assembly SL2.50 (GCF_000188115.3) 3 NC_015440.2 (54737388..54744596)

    Chromosome 3 - NC_015440.3Genomic Context describing neighboring genes Neighboring gene uncharacterized Rho GTPase-activating protein At5g61530 Neighboring gene probable isoaspartyl peptidase/L-asparaginase 3 Neighboring gene putative kinase-like protein TMKL1 Neighboring gene acid phosphatase 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    U-box domain-containing protein 35-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015440.3 Reference SL3.0 Primary Assembly

      Range
      56165473..56172715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010319871.3 → XP_010318173.1  U-box domain-containing protein 35-like

      See identical proteins and their annotated locations for XP_010318173.1

      UniProtKB/TrEMBL
      A0A3Q7FLH1
      Conserved Domains (4) summary
      smart00504
      Location:744 → 806
      Ubox; Modified RING finger domain
      smart00220
      Location:463 → 655
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd01989
      Location:25 → 176
      STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...
      cl21453
      Location:464 → 714
      PKc_like; Protein Kinases, catalytic domain

    2. XM_010319872.3 → XP_010318174.1  U-box domain-containing protein 35-like

      See identical proteins and their annotated locations for XP_010318174.1

      UniProtKB/TrEMBL
      A0A3Q7FLH1
      Conserved Domains (4) summary
      smart00504
      Location:744 → 806
      Ubox; Modified RING finger domain
      smart00220
      Location:463 → 655
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd01989
      Location:25 → 176
      STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...
      cl21453
      Location:464 → 714
      PKc_like; Protein Kinases, catalytic domain

    3. XM_019212948.2 → XP_019068493.1  U-box domain-containing protein 35-like

      UniProtKB/TrEMBL
      A0A3Q7FLH1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases