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    LOC101254760 GDSL esterase/lipase At4g18970-like [ Solanum lycopersicum (tomato) ]

    Gene ID: 101254760, updated on 1-Nov-2024

    Summary

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    Gene symbol
    LOC101254760
    Gene description
    GDSL esterase/lipase At4g18970-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101254760 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 2 NC_090801.1 (57227470..57235408)
    103 previous assembly SL3.0 (GCF_000188115.4) 2 NC_015439.3 (41589696..41597649)

    Chromosome 2 - NC_090801.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At5g45670 Neighboring gene GDSL esterase/lipase At1g29670 Neighboring gene uncharacterized LOC104645877 Neighboring gene uncharacterized LOC101266785

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDSL esterase/lipase At4g18970-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLM_r2.1 Primary Assembly

    Genomic

    1. NC_090801.1 Reference SLM_r2.1 Primary Assembly

      Range
      57227470..57235408
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010318574.4 → XP_010316876.1  GDSL esterase/lipase At4g18970-like isoform X1

      Conserved Domains (1) summary
      cl01053
      Location:2 → 127
      SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...

    2. XM_010318577.4 → XP_010316879.1  GDSL esterase/lipase At4g18970-like isoform X2

      See identical proteins and their annotated locations for XP_010316879.1

      Conserved Domains (1) summary
      cl01053
      Location:2 → 127
      SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...

    3. XM_010318578.4 → XP_010316880.1  GDSL esterase/lipase At4g18970-like isoform X2

      See identical proteins and their annotated locations for XP_010316880.1

      Conserved Domains (1) summary
      cl01053
      Location:2 → 127
      SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...

    RNA

    1. XR_003245274.2 RNA Sequence

    2. XR_740077.4 RNA Sequence

    3. XR_740076.4 RNA Sequence

    4. XR_740079.4 RNA Sequence

    5. XR_740075.4 RNA Sequence

    6. XR_011214736.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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