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    LOC104545171 secreted frizzled-related protein 1-like [ Mesitornis unicolor (brown roatelo) ]

    Gene ID: 104545171, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC104545171
    Gene description
    secreted frizzled-related protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mesitornis unicolor
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Mesitornithiformes; Mesitornithidae; Mesitornis
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC104545171 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM69576v1 (GCF_000695765.1) Unplaced Scaffold NW_010201857.1 (6..4972)

    NW_010201857.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010201857.1 Unplaced Scaffold Reference ASM69576v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Wnt-protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in non-canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secreted frizzled-related protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mesitornis unicolor Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69576v1

    Genomic

    1. NW_010201857.1 Reference ASM69576v1

      Range
      6..4972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010190233.1 → XP_010188535.1  secreted frizzled-related protein 1-like

      Conserved Domains (2) summary
      cl02447
      Location:17 → 122
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl02512
      Location:130 → 154
      NTR_like; NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the ...
    Nucleotide Protein
    Heading Accession and Version

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