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    LOC104514094 glutamate decarboxylase 2-like [ Eurypyga helias (sunbittern) ]

    Gene ID: 104514094, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC104514094
    Gene description
    glutamate decarboxylase 2-like
    Locus tag
    N326_03411
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eurypyga helias
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Phaethontimorphae; Eurypygiformes; Eurypygidae; Eurypyga
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    Genomic context

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    See LOC104514094 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ASM69077v1 (GCF_000690775.1) Unplaced Scaffold NW_010227816.1 (56380..89250, complement)

    NW_010227816.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010227816.1 Unplaced Scaffold Reference ASM69077v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutamate decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gamma-aminobutyrate shunt IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamate decarboxylase 2-like
    Names
    Glutamate decarboxylase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eurypyga helias Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69077v1

    Genomic

    1. NW_010227816.1 Reference ASM69077v1

      Range
      56380..89250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010157646.1 → XP_010155948.1  glutamate decarboxylase 2-like

      UniProtKB/TrEMBL
      A0A093I6B5
      Conserved Domains (1) summary
      cd06450
      Location:62 → 466
      DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
    Nucleotide Protein
    Heading Accession and Version

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