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    LOC21410548 metacaspase-9 [ Morus notabilis ]

    Gene ID: 21410548, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC21410548
    Gene description
    metacaspase-9
    Locus tag
    L484_027943
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Morus notabilis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Moreae; Morus
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    Genomic context

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    See LOC21410548 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM41409v2 (GCF_000414095.1) Unplaced Scaffold NW_010367622.1 (1178343..1179958, complement)

    NW_010367622.1Genomic Context describing neighboring genes Neighboring gene calmodulin-7 Neighboring gene uncharacterized LOC21410547 Neighboring gene U5 spliceosomal RNA Neighboring gene glutathione S-transferase zeta class

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010367622 Unplaced Scaffold Reference ASM41409v2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    metacaspase-9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Morus notabilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM41409v2

    Genomic

    1. NW_010367622.1 Reference ASM41409v2

      Range
      1178343..1179958 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010112988.2 → XP_010111290.1  metacaspase-9

      See identical proteins and their annotated locations for XP_010111290.1

      UniProtKB/TrEMBL
      W9SFL7
      Conserved Domains (1) summary
      pfam00656
      Location:7 → 300
      Peptidase_C14; Caspase domain
    Nucleotide Protein
    Heading Accession and Version

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