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    CTBP1 C-terminal binding protein 1 [ Egretta garzetta (little egret) ]

    Gene ID: 104135241, updated on 3-Aug-2024

    Summary

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    Gene symbol
    CTBP1
    Gene description
    C-terminal binding protein 1
    Locus tag
    Z169_05285
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Egretta garzetta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
    Orthologs
    human mouse all
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    Genomic context

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    See CTBP1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258675.1 (60881..317407)

    NW_009258675.1Genomic Context describing neighboring genes Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC118451663 Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene spondin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009258675 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM68718v1 Primary Assembly

    Genomic

    1. NW_009258675.1 Reference ASM68718v1 Primary Assembly

      Range
      60881..317407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009648865.2 → XP_009647160.1  C-terminal-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (2) summary
      COG0111
      Location:61 → 360
      SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_035888637.1 → XP_035744530.1  C-terminal-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_035888639.1 → XP_035744532.1  C-terminal-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (1) summary
      cd05299
      Location:19 → 337
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    4. XM_009648866.2 → XP_009647161.1  C-terminal-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (2) summary
      COG0111
      Location:36 → 335
      SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:9 → 327
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_035888638.1 → XP_035744531.1  C-terminal-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (1) summary
      cd05299
      Location:26 → 344
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    6. XM_035888641.1 → XP_035744534.1  C-terminal-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    7. XM_035888642.1 → XP_035744535.1  C-terminal-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A091IUP2
      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein
    Heading Accession and Version

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