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    LOC104118750 protein SAWADEE HOMEODOMAIN HOMOLOG 2 [ Nicotiana tomentosiformis ]

    Gene ID: 104118750, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC104118750
    Gene description
    protein SAWADEE HOMEODOMAIN HOMOLOG 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nicotiana tomentosiformis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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    Genomic context

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    See LOC104118750 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current Ntom_v01 (GCF_000390325.2) Unplaced Scaffold NW_008914632.1 (1625..10231)

    NW_008914632.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104118751 Neighboring gene anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008914632 Unplaced Scaffold Reference Ntom_v01 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SAWADEE HOMEODOMAIN HOMOLOG 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nicotiana tomentosiformis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ntom_v01 Primary Assembly

    Genomic

    1. NW_008914632.1 Reference Ntom_v01 Primary Assembly

      Range
      1625..10231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009630087.3 → XP_009628382.1  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1

      Conserved Domains (2) summary
      smart00389
      Location:13 → 75
      HOX; Homeodomain
      pfam16719
      Location:163 → 290
      SAWADEE; SAWADEE domain

    2. XM_009630088.3 → XP_009628383.1  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2

      Conserved Domains (2) summary
      smart00389
      Location:13 → 75
      HOX; Homeodomain
      pfam16719
      Location:161 → 288
      SAWADEE; SAWADEE domain

    3. XM_009630089.3 → XP_009628384.1  protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X3

      Conserved Domains (2) summary
      smart00389
      Location:13 → 75
      HOX; Homeodomain
      pfam16719
      Location:146 → 273
      SAWADEE; SAWADEE domain
    Nucleotide Protein
    Heading Accession and Version

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