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    PHYSODRAFT_315502 hypothetical protein [ Phytophthora sojae ]

    Gene ID: 20643871, updated on 18-Sep-2024

    Summary

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    Gene symbol
    PHYSODRAFT_315502
    Gene description
    hypothetical protein
    Locus tag
    PHYSODRAFT_315502
    See related
    FungiDB:PHYSODRAFT_315502; VEuPathDB:PHYSODRAFT_315502
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Phytophthora sojae (strain: P6497)
    Lineage
    Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_009258119.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009258119.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Tyler BM, et al. Science, 2006 Sep 1. PMID 16946064
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arachidonate secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phospholipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_009258119.1 Reference assembly

      Range
      883224..884600 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009530118.1 → XP_009528413.1  hypothetical protein PHYSODRAFT_315502 [Phytophthora sojae]

      See identical proteins and their annotated locations for XP_009528413.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G4ZMU1
      Conserved Domains (1) summary
      pfam06951
      Location:37 → 149
      PLA2G12; Group XII secretory phospholipase A2 precursor (PLA2G12)
    Nucleotide Protein
    Heading Accession and Version

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