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    NBEA neurobeachin [ Nipponia nippon (crested ibis) ]

    Gene ID: 104020280, updated on 3-Aug-2024

    Summary

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    Gene symbol
    NBEA
    Gene description
    neurobeachin
    Locus tag
    Y956_09583
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nipponia nippon
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
    Orthologs
    human mouse all
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    Genomic context

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    See NBEA in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    58
    Annotation release Status Assembly Chr Location
    100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009002853.1 (52673..567212, complement)

    NW_009002853.1Genomic Context describing neighboring genes Neighboring gene mab-21 like 1 Neighboring gene putative methyltransferase KIAA1456 Neighboring gene replication factor C subunit 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009002853.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neurobeachin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM70822v1 Primary Assembly

    Genomic

    1. NW_009002853.1 Reference ASM70822v1 Primary Assembly

      Range
      52673..567212 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009473667.1 → XP_009471942.1  neurobeachin isoform X1

      UniProtKB/TrEMBL
      A0A091VV99
      Conserved Domains (8) summary
      COG2319
      Location:2594 → 2893
      WD40; WD40 repeat [General function prediction only]
      pfam02138
      Location:2246 → 2522
      Beach; Beige/BEACH domain
      pfam06469
      Location:1925 → 2091
      DUF1088; Domain of Unknown Function (DUF1088)
      pfam14844
      Location:2117 → 2214
      PH_BEACH; PH domain associated with Beige/BEACH
      pfam15787
      Location:430 → 701
      DUF4704; Domain of unknown function (DUF4704)
      sd00039
      Location:2683 → 2737
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:2636 → 2893
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl22861
      Location:213 → 360
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    2. XM_009473668.1 → XP_009471943.1  neurobeachin isoform X2

      UniProtKB/TrEMBL
      A0A091VV99
      Conserved Domains (8) summary
      COG2319
      Location:2562 → 2861
      WD40; WD40 repeat [General function prediction only]
      pfam02138
      Location:2214 → 2490
      Beach; Beige/BEACH domain
      pfam06469
      Location:1893 → 2059
      DUF1088; Domain of Unknown Function (DUF1088)
      pfam14844
      Location:2085 → 2182
      PH_BEACH; PH domain associated with Beige/BEACH
      pfam15787
      Location:430 → 701
      DUF4704; Domain of unknown function (DUF4704)
      sd00039
      Location:2651 → 2705
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:2604 → 2861
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl22861
      Location:213 → 360
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein
    Heading Accession and Version

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