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    RPS12 ribosomal protein S12 [ Aptenodytes forsteri (emperor penguin) ]

    Gene ID: 103900748, updated on 3-Aug-2024

    Summary

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    Gene symbol
    RPS12
    Gene description
    ribosomal protein S12
    Locus tag
    AS27_14842
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aptenodytes forsteri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
    Orthologs
    human mouse all
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    Genomic context

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    See RPS12 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795490.1 (11569595..11573070, complement)

    NW_008795490.1Genomic Context describing neighboring genes Neighboring gene transcription factor 21 Neighboring gene EYA transcriptional coactivator and phosphatase 4 Neighboring gene vascular non-inflammatory molecule 3-like Neighboring gene solute carrier family 18 member B1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008795490.1 Unplaced Scaffold Reference ASM69914v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69914v1

    Genomic

    1. NW_008795490.1 Reference ASM69914v1

      Range
      11569595..11573070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009281507.2 → XP_009279782.1  40S ribosomal protein S12

      See identical proteins and their annotated locations for XP_009279782.1

      UniProtKB/TrEMBL
      A0A087R6D1
      Conserved Domains (1) summary
      pfam01248
      Location:5 → 100
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
    Nucleotide Protein
    Heading Accession and Version

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