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    LOC103834898 31 kDa ribonucleoprotein, chloroplastic [ Brassica rapa (field mustard) ]

    Gene ID: 103834898, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103834898
    Gene description
    31 kDa ribonucleoprotein, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103834898 in Genome Data Viewer
    Location:
    chromosome: A8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A08 NC_024802.2 (15608608..15610138)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A8 NC_024802.1 (14781269..14782787)

    Chromosome A08 - NC_024802.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117127271 Neighboring gene probable pectate lyase 18 Neighboring gene protein NBR1 homolog Neighboring gene zinc-finger homeodomain protein 2 Neighboring gene protein S-acyltransferase 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    31 kDa ribonucleoprotein, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024802.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      15608608..15610138
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009110992.3 → XP_009109240.1  31 kDa ribonucleoprotein, chloroplastic

      UniProtKB/TrEMBL
      A0A397YC49, M4D1Y3
      Conserved Domains (2) summary
      COG0724
      Location:35 → 291
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12399
      Location:118 → 195
      RRM_HP0827_like; RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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