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    LOC103828787 14 kDa zinc-binding protein [ Brassica rapa (field mustard) ]

    Gene ID: 103828787, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103828787
    Gene description
    14 kDa zinc-binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103828787 in Genome Data Viewer
    Location:
    chromosome: A7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A07 NC_024801.2 (10055722..10057398)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A7 NC_024801.1 (5376250..5377823)

    Chromosome A07 - NC_024801.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117126826 Neighboring gene small nucleolar RNA R71 Neighboring gene TLC domain-containing protein 4-B Neighboring gene uncharacterized LOC103828788 Neighboring gene uncharacterized protein At4g15970-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables adenylylsulfatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in purine ribonucleotide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sulfur compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    14 kDa zinc-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024801.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      10055722..10057398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009104423.3 → XP_009102671.1  14 kDa zinc-binding protein

      UniProtKB/TrEMBL
      A0A397YIC1, M4DEI3
      Conserved Domains (1) summary
      cd01276
      Location:71 → 175
      PKCI_related; Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a ...
    Nucleotide Protein
    Heading Accession and Version

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