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    LOC103861500 protein MODIFIER OF SNC1 1 [ Brassica rapa (field mustard) ]

    Gene ID: 103861500, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103861500
    Gene description
    protein MODIFIER OF SNC1 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103861500 in Genome Data Viewer
    Location:
    chromosome: A3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A03 NC_024797.2 (26876297..26883358)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A3 NC_024797.1 (25672991..25679917)

    Chromosome A03 - NC_024797.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103861497 Neighboring gene uncharacterized LOC103861496 Neighboring gene glucose-6-phosphate isomerase 1, chloroplastic Neighboring gene protein NBR1 homolog Neighboring gene uncharacterized LOC103861502 Neighboring gene alpha/beta hydrolase domain-containing protein 17C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in epigenetic regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein MODIFIER OF SNC1 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024797.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      26876297..26883358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009139217.3 → XP_009137465.1  protein MODIFIER OF SNC1 1 isoform X1

      UniProtKB/TrEMBL
      A0A8D9GPC7
      Conserved Domains (3) summary
      pfam07001
      Location:15 → 134
      BAT2_N; BAT2 N-terminus
      cl00591
      Location:601 → 671
      FlaG; FlaG protein
      cl09506
      Location:377 → 499
      catalase_like; Catalase-like heme-binding proteins and protein domains

    2. XM_009139218.2 → XP_009137466.1  protein MODIFIER OF SNC1 1 isoform X2

      UniProtKB/TrEMBL
      A0A8D9GPC7, M4DRS0
      Conserved Domains (3) summary
      pfam07001
      Location:14 → 133
      BAT2_N; BAT2 N-terminus
      cl00591
      Location:600 → 670
      FlaG; FlaG protein
      cl09506
      Location:376 → 498
      catalase_like; Catalase-like heme-binding proteins and protein domains
    Nucleotide Protein
    Heading Accession and Version

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