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    LOC103861328 probable protein S-acyltransferase 13 [ Brassica rapa (field mustard) ]

    Gene ID: 103861328, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103861328
    Gene description
    probable protein S-acyltransferase 13
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103861328 in Genome Data Viewer
    Location:
    chromosome: A3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A03 NC_024797.2 (25902217..25904487, complement)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A3 NC_024797.1 (24697774..24699878, complement)

    Chromosome A03 - NC_024797.2Genomic Context describing neighboring genes Neighboring gene flavonoid 3'-monooxygenase CYP75B137 Neighboring gene uncharacterized LOC117132635 Neighboring gene uncharacterized LOC103861327 Neighboring gene uncharacterized LOC117132826 Neighboring gene cysteine-rich receptor-like protein kinase 11 Neighboring gene transfer RNA lysine (anticodon CUU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-L-cysteine S-palmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable protein S-acyltransferase 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024797.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      25902217..25904487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009139028.3 → XP_009137276.1  probable protein S-acyltransferase 13

      UniProtKB/TrEMBL
      A0A398A4J9, M4DS68
      Conserved Domains (1) summary
      pfam01529
      Location:119 → 244
      zf-DHHC; DHHC palmitoyltransferase
    Nucleotide Protein
    Heading Accession and Version

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