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    LOC103859677 5'-adenylylsulfate reductase 3, chloroplastic [ Brassica rapa (field mustard) ]

    Gene ID: 103859677, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103859677
    Gene description
    5'-adenylylsulfate reductase 3, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103859677 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A01 NC_024795.2 (6617901..6619824, complement)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A1 NC_024795.1 (6437208..6439026, complement)

    Chromosome A01 - NC_024795.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103859660 Neighboring gene autophagy-related protein 8a Neighboring gene uncharacterized LOC103859696 Neighboring gene L-ascorbate oxidase homolog Neighboring gene microRNA MIR5712

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoadenylyl-sulfate reductase (thioredoxin) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-adenylylsulfate reductase 3, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024795.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      6617901..6619824 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018652638.2 → XP_018508154.1  5'-adenylylsulfate reductase 3, chloroplastic isoform X1

      UniProtKB/TrEMBL
      A0A398AT09

    2. XM_009137248.3 → XP_009135496.1  5'-adenylylsulfate reductase 3, chloroplastic isoform X2

      UniProtKB/TrEMBL
      A0A3P5ZRY6, M4DAR9
      Conserved Domains (1) summary
      TIGR00424
      Location:1 → 468
      APS_reduc; 5'-adenylylsulfate reductase, thioredoxin-independent
    Nucleotide Protein
    Heading Accession and Version

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