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    LOC103640022 peroxidase 4 [ Zea mays ]

    Gene ID: 103640022, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103640022
    Gene description
    peroxidase 4
    Locus tag
    ZEAMMB73_Zm00001d046035
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G097934
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    Genomic context

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    See LOC103640022 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 9 NC_050104.1 (59389197..59390698)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 9 NC_024467.2 (57472678..57474020)

    Chromosome 9 - NC_050104.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109942388 Neighboring gene RNA-binding KH domain-containing protein RCF3 Neighboring gene uncharacterized LOC118473317 Neighboring gene small nucleolar RNA Z103

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxidase 4
    Names
    Peroxidase 52

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050104.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      59389197..59390698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008662683.3 → XP_008660905.1  peroxidase 4

      See identical proteins and their annotated locations for XP_008660905.1

      UniProtKB/TrEMBL
      A0A3L6D9I7, K7VV24
      Conserved Domains (1) summary
      cd00693
      Location:27 → 322
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
    Nucleotide Protein
    Heading Accession and Version

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