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    LOC103651387 lipid phosphate phosphatase 2 [ Zea mays ]

    Gene ID: 103651387, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103651387
    Gene description
    lipid phosphate phosphatase 2
    Locus tag
    ZEAMMB73_Zm00001d043947
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G024144
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    Genomic context

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    See LOC103651387 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 3 NC_050098.1 (216380408..216382808)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 3 NC_024461.2 (214417750..214420150)

    Chromosome 3 - NC_050098.1Genomic Context describing neighboring genes Neighboring gene HMG1/2-like protein Neighboring gene U4 spliceosomal RNA Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene uncharacterized LOC100383722

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phospholipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lipid phosphate phosphatase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050098.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      216380408..216382808
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008677024.3 → XP_008675246.1  lipid phosphate phosphatase 2

      See identical proteins and their annotated locations for XP_008675246.1

      UniProtKB/TrEMBL
      A0A3L6FHB5, A0A804NFM3
      Conserved Domains (1) summary
      cd03390
      Location:58 → 245
      PAP2_containing_1_like; PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both ...
    Nucleotide Protein
    Heading Accession and Version

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