U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC100191905 Peroxidase 64 [ Zea mays ]

    Gene ID: 100191905, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100191905
    Gene description
    Peroxidase 64
    Locus tag
    ZEAMMB73_Zm00001d027411
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G341934
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100191905 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (4672172..4675727, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (4718946..4722409, complement)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene B3 domain-containing protein Os03g0120900 Neighboring gene uncharacterized LOC103631065 Neighboring gene uncharacterized LOC100381417 Neighboring gene uncharacterized LOC100217148

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    3. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasmodesma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Peroxidase 64; uncharacterized protein LOC100191905
    Names
    peroxidase 66

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001137329.1 → NP_001130801.1  Peroxidase 64 precursor

      See identical proteins and their annotated locations for NP_001130801.1

      Status: PROVISIONAL

      Source sequence(s)
      BT034153
      UniProtKB/TrEMBL
      B4FAL5
      Conserved Domains (1) summary
      cd00693
      Location:18 → 272
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      4672172..4675727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008675083.4 → XP_008673305.1  uncharacterized protein LOC100191905 isoform X1

      See identical proteins and their annotated locations for XP_008673305.1

      UniProtKB/TrEMBL
      A0A317YGH3, B4FNL8
      Conserved Domains (1) summary
      cd00693
      Location:27 → 327
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases

    2. XM_008675108.4 → XP_008673330.1  uncharacterized protein LOC100191905 isoform X2

      See identical proteins and their annotated locations for XP_008673330.1

      UniProtKB/TrEMBL
      A0A317YGH3, B4FLI3
      Conserved Domains (2) summary
      cd00693
      Location:27 → 301
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
      PLN03030
      Location:24 → 299
      PLN03030; cationic peroxidase; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials