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    DDB_G0282653 Rab GTPase [ Dictyostelium discoideum AX4 ]

    Gene ID: 8623716, updated on 17-May-2024

    Summary

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    Gene symbol
    DDB_G0282653
    Gene description
    Rab GTPase
    Primary source
    dictyBase:DDB_G0282653
    Locus tag
    DDB_G0282653
    See related
    AmoebaDB:DDB_G0282653; VEuPathDB:DDB_G0282653
    Gene type
    protein coding
    RNA name
    Rab GTPase
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
    Old locus tag
    DDBDRAFT_0204892; DDBDRAFT_0230049; DDB_0204892; DDB_0230049
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_007089.4 (6060135..6060989)

    Chromosome 3 - NC_007089.4Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene small GTPase Neighboring gene hypothetical protein Neighboring gene UPF0534 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007089.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Names
    Rab GTPase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007089.4 Reference assembly

      Range
      6060135..6060989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_635085.1 → XP_640177.1  Rab GTPase [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_640177.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q54S62
      Conserved Domains (2) summary
      smart00175
      Location:8 → 176
      RAB; Rab subfamily of small GTPases
      cd00154
      Location:8 → 149
      Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q54S62.1

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