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    AUEXF2481DRAFT_46507 uncharacterized protein [ Aureobasidium subglaciale EXF-2481 ]

    Gene ID: 25368127, updated on 6-Jan-2024

    Summary

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    Gene symbol
    AUEXF2481DRAFT_46507
    Gene description
    uncharacterized protein
    Locus tag
    AUEXF2481DRAFT_46507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aureobasidium subglaciale EXF-2481 (strain: EXF-2481, type-material: type material of Aureobasidium subglaciale)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Dothideales; Saccotheciaceae; Aureobasidium
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    Genomic context

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    See AUEXF2481DRAFT_46507 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_013566989.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_013566989.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species. Gostinčar C, et al. BMC Genomics, 2014 Jul 1. PMID 24984952, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_013566989.1 Reference assembly

      Range
      448595..449674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013489995.1 → XP_013345449.1  uncharacterized protein AUEXF2481DRAFT_46507 [Aureobasidium subglaciale EXF-2481]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A074YGE1
      Conserved Domains (3) summary
      COG5325
      Location:162 → 335
      COG5325; t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion]
      cd15844
      Location:252 → 337
      SNARE_syntaxin5; SNARE motif of syntaxin 5
      pfam11416
      Location:4 → 25
      Syntaxin-5_N; Syntaxin-5 N-terminal, Sly1p-binding domain
    Nucleotide Protein
    Heading Accession and Version

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