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    LOC103500885 GDSL esterase/lipase At5g03610-like [ Cucumis melo (muskmelon) ]

    Gene ID: 103500885, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103500885
    Gene description
    GDSL esterase/lipase At5g03610-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103500885 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 8 NC_066864.1 (8320727..8323539, complement)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546335.1 (794955..797749)

    Chromosome 8 - NC_066864.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At5g03610-like Neighboring gene GDSL esterase/lipase At5g03610-like Neighboring gene subtilisin-like protease SBT4.15 Neighboring gene IQ domain-containing protein IQM3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDSL esterase/lipase At5g03610-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066864.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      8320727..8323539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008464332.3 → XP_008462554.1  GDSL esterase/lipase At5g03610-like

      UniProtKB/TrEMBL
      A0A1S3CH96, A0A5D3CAN3
      Conserved Domains (1) summary
      cl01053
      Location:38 → 334
      SGNH_hydrolase; or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical ...
    Nucleotide Protein
    Heading Accession and Version

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