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    LOC103498309 O-fucosyltransferase 23 [ Cucumis melo (muskmelon) ]

    Gene ID: 103498309, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC103498309
    Gene description
    O-fucosyltransferase 23
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103498309 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 12 NC_066868.1 (19661707..19664355)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546316.1 (2527036..2529223)

    Chromosome 12 - NC_066868.1Genomic Context describing neighboring genes Neighboring gene ras-related protein RABF2b Neighboring gene snRNA-activating protein complex subunit Neighboring gene E3 ubiquitin-protein ligase RSL1 Neighboring gene uncharacterized LOC103498312

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in pollen-pistil interaction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    O-fucosyltransferase 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066868.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      19661707..19664355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051080636.1 → XP_050936593.1  O-fucosyltransferase 23

      UniProtKB/TrEMBL
      A0A1S4E296, A0A5A7TPH5

    2. XM_008460877.3 → XP_008459099.1  O-fucosyltransferase 23

      See identical proteins and their annotated locations for XP_008459099.1

      UniProtKB/TrEMBL
      A0A1S4E296, A0A5A7TPH5, A0A9I9DQ73
      Conserved Domains (1) summary
      pfam10250
      Location:83 → 384
      O-FucT; GDP-fucose protein O-fucosyltransferase

    3. XM_051080637.1 → XP_050936594.1  O-fucosyltransferase 23

      UniProtKB/TrEMBL
      A0A1S4E296, A0A5A7TPH5
    Nucleotide Protein
    Heading Accession and Version

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