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    LOC103497111 18.5 kDa class I heat shock protein-like [ Cucumis melo (muskmelon) ]

    Gene ID: 103497111, updated on 11-Apr-2024

    Summary

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    Gene symbol
    LOC103497111
    Gene description
    18.5 kDa class I heat shock protein-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103497111 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 12 NC_066868.1 (1677005..1677610, complement)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546311.1 (1260438..1261172, complement)

    Chromosome 12 - NC_066868.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103497107 Neighboring gene uncharacterized LOC103497108 Neighboring gene mitochondrial import inner membrane translocase subunit TIM10 Neighboring gene 18.5 kDa class I heat shock protein-like Neighboring gene 17.5 kDa class I heat shock protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein complex oligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hydrogen peroxide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to salt stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    18.5 kDa class I heat shock protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066868.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      1677005..1677610 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008459197.3 → XP_008457419.1  18.5 kDa class I heat shock protein-like

      UniProtKB/TrEMBL
      A0A1S3C6S1, A0A5D3BEA2
      Conserved Domains (1) summary
      cd06472
      Location:54 → 145
      ACD_ScHsp26_like; Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as ...
    Nucleotide Protein
    Heading Accession and Version

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