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    LOC103495871 transcription factor MYB60 [ Cucumis melo (muskmelon) ]

    Gene ID: 103495871, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103495871
    Gene description
    transcription factor MYB60
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103495871 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 8 NC_066864.1 (13178560..13180633)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546303.1 (3281230..3283379)

    Chromosome 8 - NC_066864.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127150766 Neighboring gene F-box protein SKIP24 Neighboring gene uncharacterized LOC127150663 Neighboring gene ABC transporter F family member 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to auxin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor MYB60
    Names
    myb-related protein 306

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066864.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      13178560..13180633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008457549.3 → XP_008455771.1  transcription factor MYB60

      See identical proteins and their annotated locations for XP_008455771.1

      UniProtKB/TrEMBL
      A0A1S3C1M3, A0A5D3CER1
      Conserved Domains (1) summary
      PLN03212
      Location:5 → 140
      PLN03212; Transcription repressor MYB5; Provisional
    Nucleotide Protein
    Heading Accession and Version

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