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    LOC103494378 proline-rich receptor-like protein kinase PERK4 [ Cucumis melo (muskmelon) ]

    Gene ID: 103494378, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103494378
    Gene description
    proline-rich receptor-like protein kinase PERK4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103494378 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 7 NC_066863.1 (25659677..25664512)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546298.1 (174531..179239)

    Chromosome 7 - NC_066863.1Genomic Context describing neighboring genes Neighboring gene transcription repressor OFP7 Neighboring gene F-box protein At5g49610-like Neighboring gene ATP-dependent DNA helicase DDM1 Neighboring gene cytochrome P450 90B1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proline-rich receptor-like protein kinase PERK4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066863.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      25659677..25664512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008455512.3 → XP_008453734.1  proline-rich receptor-like protein kinase PERK4 isoform X1

      UniProtKB/TrEMBL
      A0A1S3BX25
      Conserved Domains (2) summary
      smart00221
      Location:295 → 561
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:295 → 563
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. XM_051087192.1 → XP_050943149.1  proline-rich receptor-like protein kinase PERK4 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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