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    LOC103494131 transcription factor MYB62-like [ Cucumis melo (muskmelon) ]

    Gene ID: 103494131, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103494131
    Gene description
    transcription factor MYB62-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103494131 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 2 NC_066858.1 (23522805..23524134, complement)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546297.1 (1730811..1732107)

    Chromosome 2 - NC_066858.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103494132 Neighboring gene 40S ribosomal protein S7-like Neighboring gene transcription factor BEE 3-like Neighboring gene uncharacterized LOC103494129

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor MYB62-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066858.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      23522805..23524134 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008455187.3 → XP_008453409.1  transcription factor MYB62-like

      UniProtKB/TrEMBL
      A0A1S3BWZ6, A0A5D3DYB4
      Conserved Domains (1) summary
      PLN03212
      Location:30 → 133
      PLN03212; Transcription repressor MYB5; Provisional
    Nucleotide Protein
    Heading Accession and Version

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