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    LOC103485519 AT-hook motif nuclear-localized protein 22 [ Cucumis melo (muskmelon) ]

    Gene ID: 103485519, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103485519
    Gene description
    AT-hook motif nuclear-localized protein 22
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103485519 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 3 NC_066859.1 (2297959..2299347, complement)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546275.1 (2137949..2139263, complement)

    Chromosome 3 - NC_066859.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103485517 Neighboring gene ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic Neighboring gene thylakoid lumenal 15 kDa protein 1, chloroplastic Neighboring gene uncharacterized LOC103485521

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables minor groove of adenine-thymine-rich DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT-hook motif nuclear-localized protein 22
    Names
    putative DNA-binding protein ESCAROLA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066859.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      2297959..2299347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008443166.3 → XP_008441388.1  AT-hook motif nuclear-localized protein 22

      UniProtKB/TrEMBL
      A0A1S3B427, A0A5A7TE52
      Conserved Domains (1) summary
      cd11378
      Location:67 → 163
      DUF296; Domain of unknown function found in archaea, bacteria, and plants
    Nucleotide Protein
    Heading Accession and Version

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