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    GAPDH glyceraldehyde-3-phosphate dehydrogenase [ Terrapene triunguis (Three-toed box turtle) ]

    Gene ID: 112115085, updated on 19-May-2024

    Summary

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    Gene symbol
    GAPDH
    Gene description
    glyceraldehyde-3-phosphate dehydrogenase
    See related
    Ensembl:ENSTMTG00000004141
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Terrapene triunguis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
    Also known as
    GAPD
    Orthologs
    human mouse all
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    Genomic context

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    See GAPDH in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020665091.1 (4237691..4242705, complement)
    100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019961916.1 (570207..575226)

    NW_020665091.1Genomic Context describing neighboring genes Neighboring gene NOP2 nucleolar protein Neighboring gene intermediate filament family orphan 1 Neighboring gene non-SMC condensin I complex subunit D2 Neighboring gene small nucleolar RNA U85 Neighboring gene mitochondrial ribosomal protein L51

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glyceraldehyde-3-phosphate dehydrogenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T_m_triunguis-2.0

    Genomic

    1. NW_020665091.1 Reference T_m_triunguis-2.0

      Range
      4237691..4242705 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024212053.2 → XP_024067821.1  glyceraldehyde-3-phosphate dehydrogenase

      UniProtKB/TrEMBL
      A0A674I9Z3
      Related
      ENSTMTP00000005560.1, ENSTMTT00000005747.1
      Conserved Domains (1) summary
      PLN02272
      Location:2 → 330
      PLN02272; glyceraldehyde-3-phosphate dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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