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    F2Z28_RS20955 helix-turn-helix domain-containing protein [ Bacteroides finegoldii ]

    Gene ID: 61624634, updated on 6-Jun-2024

    Summary

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    Gene symbol
    F2Z28_RS20955
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    F2Z28_RS20955
    Gene type
    protein coding
    Organism
    Bacteroides finegoldii (strain: BIOML-A8, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    F2Z28_20960
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    Genomic context

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    NZ_VWAM01000081.1Genomic Context describing neighboring genes Neighboring gene helix-turn-helix domain-containing protein Neighboring gene helix-turn-helix domain-containing protein Neighboring gene helix-turn-helix domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_VWAM01000081.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research. Poyet M, et al. Nat Med, 2019 Sep. PMID 31477907
    2. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_VWAM01000081.1 Reference assembly

      Range
      318..674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_025072716.1 MULTISPECIES: helix-turn-helix domain-containing protein [Bacteroidales]

      See identical proteins and their annotated locations for WP_025072716.1

      UniProtKB/TrEMBL
      A0A2N6Q690, A0A2T4T332, A0A2T4TUD6, A0A3A5PEB0, A0A3A5QVF5, A0A3E4QN34, A0A412Y142, A0A414W8N5, A0A415HDQ9, A0A5M5BDS2, A0A7J4YHX6, A0A7W4E1N0, A0A9X9IS36, A0AAE5NHF9
      Conserved Domains (1) summary
      pfam12728
      Location:40 → 88
      HTH_17; Helix-turn-helix domain
    Nucleotide Protein
    Heading Accession and Version