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    LOC103191174 cholesterol 24-hydroxylase-like [ Callorhinchus milii (elephant shark) ]

    Gene ID: 103191174, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103191174
    Gene description
    cholesterol 24-hydroxylase-like
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Callorhinchus milii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC103191174 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704750.1 (23107854..23127060, complement)
    100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890759.1 (18..3167, complement)

    NW_024704750.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 43 Neighboring gene tubulin tyrosine ligase-like family, member 5 Neighboring gene vasohibin 1 Neighboring gene gsk3b interacting protein Neighboring gene autophagy related 2A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cholesterol 24-hydroxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cholesterol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cholesterol 24-hydroxylase-like
    Names
    cytochrome P450, family 46, subfamily A, polypeptide 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001292584.1 → NP_001279513.1  cholesterol 24-hydroxylase-like

      See identical proteins and their annotated locations for NP_001279513.1

      Status: PROVISIONAL

      Source sequence(s)
      JX212028
      UniProtKB/TrEMBL
      K4GCW0, K4GLB9
      Conserved Domains (1) summary
      pfam00067
      Location:49 → 501
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IMCB_Cmil_1.0 Primary Assembly

    Genomic

    1. NW_024704750.1 Reference IMCB_Cmil_1.0 Primary Assembly

      Range
      23107854..23127060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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