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    LOC100813938 BTB/POZ domain-containing protein At3g08570 [ Glycine max (soybean) ]

    Gene ID: 100813938, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100813938
    Gene description
    BTB/POZ domain-containing protein At3g08570
    Locus tag
    GLYMA_18G216600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 18
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (50640322..50644142, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (50355860..50359929, complement)

    Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene 4-hydroxybenzoate polyprenyltransferase, mitochondrial Neighboring gene uncharacterized LOC121173915 Neighboring gene uncharacterized LOC100798283 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g06840

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein At3g08570

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      50640322..50644142 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006602666.4 → XP_006602729.1  BTB/POZ domain-containing protein At3g08570 isoform X2

      UniProtKB/TrEMBL
      A0A0R0IE45, K7MTW7
      Conserved Domains (2) summary
      cl38908
      Location:30 → 128
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      pfam03000
      Location:204 → 461
      NPH3; NPH3 family

    2. XM_006602665.4 → XP_006602728.1  BTB/POZ domain-containing protein At3g08570 isoform X1

      See identical proteins and their annotated locations for XP_006602728.1

      UniProtKB/TrEMBL
      A0A0R0FB25, A0A0R0IE45
      Conserved Domains (2) summary
      cl38908
      Location:30 → 128
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      pfam03000
      Location:204 → 461
      NPH3; NPH3 family
    Nucleotide Protein
    Heading Accession and Version

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