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    CtBP C-terminal binding protein [ Apis mellifera (honey bee) ]

    Gene ID: 409158, updated on 2-Oct-2024

    Summary

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    Gene symbol
    CtBP
    Gene description
    C-terminal binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB43266
    Orthologs
    fruit fly all
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    Genomic context

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    See CtBP in Genome Data Viewer
    Location:
    chromosome: LG7
    Exon count:
    10
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG7 NC_037644.1 (177420..197497, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG7 NC_007076.3 (325724..345767)

    Linkage Group LG7 - NC_037644.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily D Neighboring gene uncharacterized LOC102653944 Neighboring gene protein glass Neighboring gene NADPH-dependent diflavin oxidoreductase 1 Neighboring gene E3 ubiquitin-protein transferase Katazuke

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037644.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      177420..197497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006557637.3 → XP_006557700.1  C-terminal-binding protein isoform X2

      See identical proteins and their annotated locations for XP_006557700.1

      UniProtKB/TrEMBL
      A0A7M7GNP2, A0A8B6YQR4
      Conserved Domains (1) summary
      cd05299
      Location:29 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_392682.7 → XP_392682.3  C-terminal-binding protein isoform X1

      See identical proteins and their annotated locations for XP_392682.3

      UniProtKB/TrEMBL
      A0A7M7GJV7, A0A7M7R518, A0A8B6YQU4, A0A8B6YSG2
      Conserved Domains (1) summary
      cd05299
      Location:29 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_006557639.3 → XP_006557702.1  C-terminal-binding protein isoform X4

      See identical proteins and their annotated locations for XP_006557702.1

      UniProtKB/TrEMBL
      A0A7M7GS64, A0A8B6YU46
      Conserved Domains (2) summary
      COG1052
      Location:46 → 355
      LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    4. XM_006557638.3 → XP_006557701.1  C-terminal-binding protein isoform X3

      See identical proteins and their annotated locations for XP_006557701.1

      UniProtKB/TrEMBL
      A0A7M7GKA8, A0A8B6YQS2
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_006557634.2 → XP_006557697.1  C-terminal-binding protein isoform X1

      See identical proteins and their annotated locations for XP_006557697.1

      UniProtKB/TrEMBL
      A0A7M7GJV7, A0A7M7R518, A0A8B6YQU4, A0A8B6YSG2
      Conserved Domains (1) summary
      cd05299
      Location:29 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    6. XM_006557635.3 → XP_006557698.1  C-terminal-binding protein isoform X1

      See identical proteins and their annotated locations for XP_006557698.1

      UniProtKB/TrEMBL
      A0A7M7GJV7, A0A7M7R518, A0A8B6YQU4, A0A8B6YSG2
      Conserved Domains (1) summary
      cd05299
      Location:29 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    7. XM_006557640.3 → XP_006557703.1  C-terminal-binding protein isoform X5

      See identical proteins and their annotated locations for XP_006557703.1

      UniProtKB/TrEMBL
      A0A7M7GIZ5, A0A8B6YSG7
      Conserved Domains (1) summary
      cd05299
      Location:29 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    8. XM_006557641.3 → XP_006557704.1  C-terminal-binding protein isoform X6

      See identical proteins and their annotated locations for XP_006557704.1

      UniProtKB/TrEMBL
      A0A7M7GJU5, A0A8B6YQU9
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein Strain
    Heading Accession and Version

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