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    LOC100801035 probable LRR receptor-like serine/threonine-protein kinase At1g06840 [ Glycine max (soybean) ]

    Gene ID: 100801035, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100801035
    Gene description
    probable LRR receptor-like serine/threonine-protein kinase At1g06840
    Locus tag
    GLYMA_14G206300v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100801035 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (48002358..48017670)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (47152440..47167908)

    Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene root phototropism protein 2 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g06840-like Neighboring gene uncharacterized LOC106795742 Neighboring gene probable disease resistance protein At4g27220 Neighboring gene callose synthase 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable LRR receptor-like serine/threonine-protein kinase At1g06840

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      48002358..48017670
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041008853.1 → XP_040864787.1  probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1

      UniProtKB/TrEMBL
      A0A0R0GFR6, I1MBM2
      Conserved Domains (3) summary
      PLN00113
      Location:10 → 887
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14066
      Location:623 → 887
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:108 → 131
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_006596417.3 → XP_006596480.1  probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1

      See identical proteins and their annotated locations for XP_006596480.1

      UniProtKB/TrEMBL
      A0A0R0GFR6, I1MBM2
      Conserved Domains (3) summary
      PLN00113
      Location:10 → 887
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14066
      Location:623 → 887
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:108 → 131
      LRR_RI; leucine-rich repeat [structural motif]

    3. XM_006596419.3 → XP_006596482.1  probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2

      UniProtKB/TrEMBL
      A0A0R0GFR6
      Conserved Domains (3) summary
      PLN00113
      Location:5 → 798
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14066
      Location:534 → 798
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:19 → 42
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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