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    LOC100799419 protein GRAVITROPIC IN THE LIGHT 1 [ Glycine max (soybean) ]

    Gene ID: 100799419, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100799419
    Gene description
    protein GRAVITROPIC IN THE LIGHT 1
    Locus tag
    GLYMA_13G268800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100799419 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (36510529..36515847)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (37110460..37115827)

    Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene mulatexin-like Neighboring gene protein transport protein Sec61 subunit alpha-like Neighboring gene GTP-binding protein Neighboring gene transfer RNA glutamic acid (anticodon CUC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative gravitropism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to red or far red light IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein GRAVITROPIC IN THE LIGHT 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      36510529..36515847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006594663.4 → XP_006594726.1  protein GRAVITROPIC IN THE LIGHT 1

      See identical proteins and their annotated locations for XP_006594726.1

      UniProtKB/TrEMBL
      I1M2Z2
      Conserved Domains (2) summary
      COG1269
      Location:117 → 329
      NtpI; Archaeal/vacuolar-type H+-ATPase subunit I/STV1 [Energy production and conversion]
      pfam04859
      Location:74 → 199
      DUF641; Plant protein of unknown function (DUF641)

    2. XM_006594664.4 → XP_006594727.1  protein GRAVITROPIC IN THE LIGHT 1

      See identical proteins and their annotated locations for XP_006594727.1

      UniProtKB/TrEMBL
      I1M2Z2
      Conserved Domains (2) summary
      COG1269
      Location:117 → 329
      NtpI; Archaeal/vacuolar-type H+-ATPase subunit I/STV1 [Energy production and conversion]
      pfam04859
      Location:74 → 199
      DUF641; Plant protein of unknown function (DUF641)

    3. XM_041008387.1 → XP_040864321.1  protein GRAVITROPIC IN THE LIGHT 1

      UniProtKB/TrEMBL
      I1M2Z2
      Conserved Domains (2) summary
      COG1269
      Location:117 → 329
      NtpI; Archaeal/vacuolar-type H+-ATPase subunit I/STV1 [Energy production and conversion]
      pfam04859
      Location:74 → 199
      DUF641; Plant protein of unknown function (DUF641)
    Nucleotide Protein
    Heading Accession and Version

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