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    LOC100803034 homeobox protein knotted-1-like LET12 [ Glycine max (soybean) ]

    Gene ID: 100803034, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100803034
    Gene description
    homeobox protein knotted-1-like LET12
    Locus tag
    GLYMA_09G095700v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (13735444..13749364)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (14429676..14443632)

    Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene activator of 90 kDa heat shock protein ATPase homolog Neighboring gene uncharacterized LOC121172753 Neighboring gene small nucleolar RNA R71

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein knotted-1-like LET12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      13735444..13749364
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003533831.5 → XP_003533879.2  homeobox protein knotted-1-like LET12 isoform X1

      UniProtKB/TrEMBL
      I1L2B3
      Conserved Domains (3) summary
      pfam03790
      Location:96 → 134
      KNOX1; KNOX1 domain
      pfam03791
      Location:152 → 202
      KNOX2; KNOX2 domain
      pfam05920
      Location:300 → 339
      Homeobox_KN; Homeobox KN domain

    2. XM_006587076.4 → XP_006587139.1  homeobox protein knotted-1-like LET12 isoform X2

      UniProtKB/TrEMBL
      A0A0R0IC27
      Conserved Domains (3) summary
      pfam03790
      Location:96 → 134
      KNOX1; KNOX1 domain
      pfam03791
      Location:152 → 202
      KNOX2; KNOX2 domain
      pfam05920
      Location:300 → 339
      Homeobox_KN; Homeobox KN domain
    Nucleotide Protein
    Heading Accession and Version

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