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    LOC100804458 protein SMAX1-LIKE 6 [ Glycine max (soybean) ]

    Gene ID: 100804458, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100804458
    Gene description
    protein SMAX1-LIKE 6
    Locus tag
    GLYMA_02G226900v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 2 NC_016089.4 (43215534..43221538)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (41387641..41393793)

    Chromosome 2 - NC_016089.4Genomic Context describing neighboring genes Neighboring gene elongator complex protein 5 Neighboring gene phosphoinositide phospholipase C 2 Neighboring gene zinc finger CCCH domain-containing protein 66-like Neighboring gene uncharacterized LOC102663707

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SMAX1-LIKE 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      43215534..43221538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006575346.4 → XP_006575409.1  protein SMAX1-LIKE 6 isoform X2

      UniProtKB/TrEMBL
      A0A0R0L7V5
      Conserved Domains (2) summary
      COG0542
      Location:645 → 844
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      cl21455
      Location:697 → 844
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. XM_006575347.4 → XP_006575410.1  protein SMAX1-LIKE 6 isoform X3

      UniProtKB/TrEMBL
      I1JHD0
      Conserved Domains (2) summary
      COG0542
      Location:643 → 842
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      cl21455
      Location:695 → 842
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    3. XM_006575345.4 → XP_006575408.1  protein SMAX1-LIKE 6 isoform X1

      Conserved Domains (1) summary
      cd19499
      Location:676 → 845
      RecA-like_ClpB_Hsp104-like; Chaperone protein ClpB/Hsp104 subfamily
    Nucleotide Protein
    Heading Accession and Version

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