U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Cldn34c3 claudin 34C3 [ Mus musculus (house mouse) ]

    Gene ID: 382265, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Cldn34c3provided by MGI
    Official Full Name
    claudin 34C3provided by MGI
    Primary source
    MGI:MGI:3645501
    See related
    Ensembl:ENSMUSG00000118430 AllianceGenome:MGI:3645501
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm5167; EG382265
    Expression
    Biased expression in testis adult (RPKM 8.6), whole brain E14.5 (RPKM 2.4) and 13 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Cldn34c3 in Genome Data Viewer
    Location:
    X E3; X 49.81 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (122697896..122732846)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (123788212..123823149)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene claudin 34C2 Neighboring gene STARR-seq mESC enhancer starr_47883 Neighboring gene ribosomal protein S12, pseudogene 23 Neighboring gene STARR-seq mESC enhancer starr_47884 Neighboring gene amplified spermatogenic transcripts X encoded 5 Neighboring gene ribosomal protein S12, pseudogene 20

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein Cldn34c3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      122697896..122732846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011247721.2 → XP_011246023.1  uncharacterized protein Cldn34c3 isoform X3

    2. XM_006528431.3 → XP_006528494.1  uncharacterized protein Cldn34c3 isoform X1

      UniProtKB/TrEMBL
      Q9CXT3

    3. XM_006528432.3 → XP_006528495.1  uncharacterized protein Cldn34c3 isoform X2

      See identical proteins and their annotated locations for XP_006528495.1

      UniProtKB/TrEMBL
      A0A991ENX4, Q9CXT3
      Related
      ENSMUSP00000159559.1, ENSMUST00000238631.3

    4. XM_006528433.1 → XP_006528496.1  uncharacterized protein Cldn34c3 isoform X2

      See identical proteins and their annotated locations for XP_006528496.1

      UniProtKB/TrEMBL
      A0A991ENX4, Q9CXT3
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.