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    LOC18040895 protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial [ Citrus x clementina ]

    Gene ID: 18040895, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18040895
    Gene description
    protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial
    Locus tag
    CICLE_v10000434mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus x clementina
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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    Genomic context

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    See LOC18040895 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262201.1 (41131304..41134626)

    NW_006262201.1Genomic Context describing neighboring genes Neighboring gene protein RADIALIS-like 6 Neighboring gene U-box domain-containing protein 5 Neighboring gene CBS domain-containing protein CBSX3, mitochondrial Neighboring gene proteoglycan 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006262201 Unplaced Scaffold Reference Citrus_clementina_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Citrus_clementina_v1.0

    Genomic

    1. NW_006262201.1 Reference Citrus_clementina_v1.0

      Range
      41131304..41134626
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006434948.2 → XP_006435011.1  protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial

      See identical proteins and their annotated locations for XP_006435011.1

      UniProtKB/TrEMBL
      V4TF11
      Conserved Domains (5) summary
      TIGR00756
      Location:382 → 414
      PPR; pentatricopeptide repeat domain (PPR motif)
      sd00004
      Location:382 → 408
      PPR; PPR repeat [structural motif]
      pfam01535
      Location:451 → 480
      PPR; PPR repeat
      pfam12854
      Location:408 → 438
      PPR_1; PPR repeat
      pfam13041
      Location:412 → 461
      PPR_2; PPR repeat family
    Nucleotide Protein
    Heading Accession and Version

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