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    LOC7487852 cinnamoyl-CoA reductase-like SNL6 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7487852, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC7487852
    Gene description
    cinnamoyl-CoA reductase-like SNL6
    Locus tag
    POPTR_001G349600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7487852 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 1 NC_037285.2 (36176329..36179363)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 1 NC_037285.1 (35607226..35610278)

    Chromosome 1 - NC_037285.2Genomic Context describing neighboring genes Neighboring gene probable NOT transcription complex subunit VIP2 Neighboring gene small nucleolar RNA snoR35 Neighboring gene uncharacterized LOC7487853 Neighboring gene small nucleolar RNA snoR1 Neighboring gene uncharacterized LOC112323363 Neighboring gene uncharacterized LOC7487851

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in steroid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cinnamoyl-CoA reductase-like SNL6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037285.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      36176329..36179363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002299997.4 → XP_002300033.2  cinnamoyl-CoA reductase-like SNL6

      See identical proteins and their annotated locations for XP_002300033.2

      UniProtKB/TrEMBL
      B9GHQ5
      Conserved Domains (1) summary
      PLN02686
      Location:1 → 364
      PLN02686; cinnamoyl-CoA reductase
    Nucleotide Protein
    Heading Accession and Version

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