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    LOC18009682 phosphatidate cytidylyltransferase 1 [ Eutrema salsugineum ]

    Gene ID: 18009682, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18009682
    Gene description
    phosphatidate cytidylyltransferase 1
    Locus tag
    EUTSA_v10023471mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eutrema salsugineum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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    Genomic context

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    See LOC18009682 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256414.1 (1767961..1771585)

    NW_006256414.1Genomic Context describing neighboring genes Neighboring gene rho GDP-dissociation inhibitor 1 Neighboring gene leucine-rich repeat extensin-like protein 2 Neighboring gene uncharacterized LOC18009683 Neighboring gene uncharacterized LOC18009757

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006256414 Unplaced Scaffold Reference Eutsalg1_0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidate cytidylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidate cytidylyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Eutsalg1_0

    Genomic

    1. NW_006256414.1 Reference Eutsalg1_0

      Range
      1767961..1771585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006391806.2 → XP_006391868.1  phosphatidate cytidylyltransferase 1

      See identical proteins and their annotated locations for XP_006391868.1

      UniProtKB/TrEMBL
      V4KDG0
      Conserved Domains (1) summary
      PLN02594
      Location:83 → 424
      PLN02594; phosphatidate cytidylyltransferase
    Nucleotide Protein
    Heading Accession and Version

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