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    LOC102357107 spindlin-Z [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102357107, updated on 26-Apr-2024

    Summary

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    Gene symbol
    LOC102357107
    Gene description
    spindlin-Z
    See related
    Ensembl:ENSLACG00000010820
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    SPIN1
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    Genomic context

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    See LOC102357107 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 1 NC_088139.1 (102788083..102912454)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819703.1 (538007..666605)

    Chromosome 1 - NC_088139.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene hippocampus abundant transcript-like protein 1 Neighboring gene uncharacterized LOC135355680 Neighboring gene uncharacterized LOC102358428 Neighboring gene nucleoredoxin like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in gamete generation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindlin-Z
    Names
    spindlin 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088139.1 Reference fLatCha1.pri

      Range
      102788083..102912454
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006001356.2 → XP_006001418.1  spindlin-Z isoform X2

      UniProtKB/TrEMBL
      H3ARL8
      Related
      ENSLACP00000012289.1, ENSLACT00000012382.1
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    2. XM_006001355.3 → XP_006001417.1  spindlin-Z isoform X1

      See identical proteins and their annotated locations for XP_006001417.1

      Conserved Domains (2) summary
      pfam02513
      Location:83 → 131
      Spin-Ssty; Spin/Ssty Family
      pfam16174
      Location:2 → 44
      IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal

    3. XM_006001354.3 → XP_006001416.1  spindlin-Z isoform X1

      See identical proteins and their annotated locations for XP_006001416.1

      Conserved Domains (2) summary
      pfam02513
      Location:83 → 131
      Spin-Ssty; Spin/Ssty Family
      pfam16174
      Location:2 → 44
      IHABP4_N; Intracellular hyaluronan-binding protein 4 N-terminal

    4. XM_064555956.1 → XP_064412026.1  spindlin-Z isoform X3

    5. XM_014491653.2 → XP_014347139.1  spindlin-Z isoform X3

      Conserved Domains (1) summary
      pfam02513
      Location:29 → 77
      Spin-Ssty; Spin/Ssty Family
    Nucleotide Protein
    Heading Accession and Version

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