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    lgmn legumain [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448252, updated on 18-Sep-2024

    Summary

    Official Symbol
    lgmnprovided by Xenbase
    Official Full Name
    legumainprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-950605
    See related
    Ensembl:ENSXETG00000010300
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
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    Genomic context

    See lgmn in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (87545186..87565962, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (66479076..66502476, complement)

    Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 24 member 4 Neighboring gene Ras and Rab interactor 3 Neighboring gene golgin A5 Neighboring gene chromogranin A

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005720.1NP_001005720.1  legumain precursor

      See identical proteins and their annotated locations for NP_001005720.1

      Status: PROVISIONAL

      Source sequence(s)
      BC075316
      UniProtKB/TrEMBL
      A0A6I8RUM7, F6YZ63, F7DUM1, Q6DJ67
      Related
      ENSXETP00000022687.4, ENSXETT00000022687.5
      Conserved Domains (1) summary
      pfam01650
      Location:29285
      Peptidase_C13; Peptidase C13 family

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      87545186..87565962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)