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    MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100401295, updated on 19-Jun-2024

    Summary

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    Gene symbol
    MMS19
    Gene description
    MMS19 homolog, cytosolic iron-sulfur assembly component
    See related
    Ensembl:ENSCJAG00000016651
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See MMS19 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (86928883..86970776, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (87650397..87692239, complement)

    Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene exosome component 1 Neighboring gene zinc finger DHHC-type palmitoyltransferase 16 Neighboring gene ubiquitin domain containing 1 Neighboring gene ankyrin repeat domain 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein maturation by iron-sulfur cluster transfer IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MMXD complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cytosolic [4Fe-4S] assembly targeting complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MMS19 nucleotide excision repair protein homolog
    Names
    MMS19 nucleotide excision repair homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071453.1 Reference mCalJa1.2.pat.X

      Range
      86928883..86970776 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035268656.2 → XP_035124547.1  MMS19 nucleotide excision repair protein homolog isoform X2

      UniProtKB/TrEMBL
      A0A8I4A2R7
      Conserved Domains (2) summary
      pfam12460
      Location:554 → 961
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:53 → 311
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    2. XM_035268657.2 → XP_035124548.1  MMS19 nucleotide excision repair protein homolog isoform X3

      UniProtKB/TrEMBL
      A0A8I3WXU7, A0A8I4A2R7
      Conserved Domains (2) summary
      pfam12460
      Location:555 → 910
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:53 → 311
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    3. XM_009010096.4 → XP_009008344.1  MMS19 nucleotide excision repair protein homolog isoform X1

      See identical proteins and their annotated locations for XP_009008344.1

      UniProtKB/TrEMBL
      A0A8I4A2R7, F6W7W4, U3C261
      Related
      ENSCJAP00000030760.2
      Conserved Domains (2) summary
      pfam12460
      Location:555 → 962
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:53 → 311
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II
    Nucleotide Protein
    Heading Accession and Version

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