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    qars1 glutaminyl-tRNA synthetase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100145804, updated on 4-Nov-2024

    Summary

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    Official Symbol
    qars1provided by Xenbase
    Official Full Name
    glutaminyl-tRNA synthetase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5802152
    See related
    Ensembl:ENSXETG00000009351 AllianceGenome:Xenbase:XB-GENE-5802152
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    qars
    Summary
    Predicted to enable ATP binding activity and glutamine-tRNA ligase activity. Predicted to act upstream of or within glutaminyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Orthologous to human QARS1 (glutaminyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See qars1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (136814875..136876554, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (126288109..126348350, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 3 Neighboring gene IMP (inosine 5'-monophosphate) dehydrogenase 2 Neighboring gene glutamine-rich 1 Neighboring gene uncharacterized LOC105947016 Neighboring gene Pim-1 proto-oncogene, serine/threonine kinase Neighboring gene uncharacterized LOC116410277

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables aminoacyl-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glutamine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within glutaminyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of aminoacyl-tRNA synthetase multienzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    glutamine--tRNA ligase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      136814875..136876554 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004914097.3 → XP_004914154.1  glutamine--tRNA ligase

      UniProtKB/TrEMBL
      A0A6I8PWQ6, B1WBK8
      Related
      ENSXETP00000060182.2, ENSXETT00000063329.3
      Conserved Domains (1) summary
      PLN02859
      Location:5 → 771
      PLN02859; glutamine-tRNA ligase
    Nucleotide Protein Strain
    Heading Accession and Version

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