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    SOST sclerostin [ Echinops telfairi (small Madagascar hedgehog) ]

    Gene ID: 101641120, updated on 20-Sep-2024

    Summary

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    Gene symbol
    SOST
    Gene description
    sclerostin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Echinops telfairi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
    Orthologs
    human mouse all
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    Genomic context

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    See SOST in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current ASM31398v2 (GCF_000313985.2) Unplaced Scaffold NW_022111358.1 (30919298..30923749, complement)
    101 previous assembly EchTel2.0 (GCF_000313985.1) Unplaced Scaffold NW_004558727.1 (30919298..30923767, complement)

    NW_022111358.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA69 Neighboring gene mesenchyme homeobox 1 Neighboring gene CFAP97 domain containing 1 Neighboring gene dual specificity phosphatase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables BMP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ossification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sclerostin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Echinops telfairi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM31398v2 Primary Assembly

    Genomic

    1. NW_022111358.1 Reference ASM31398v2 Primary Assembly

      Range
      30919298..30923749 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004707500.2 → XP_004707557.1  sclerostin

      Conserved Domains (1) summary
      cl21545
      Location:29 → 117
      GHB_like; Glycoprotein hormone beta chain homologues
    Nucleotide Protein
    Heading Accession and Version

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