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    TTH_RS01035 ribonuclease HII [ Thermus thermophilus HB8 ]

    Gene ID: 3168603, updated on 12-Feb-2024

    Summary

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    Gene symbol
    TTH_RS01035
    Gene description
    ribonuclease HII
    Locus tag
    TTH_RS01035
    Gene type
    protein coding
    Organism
    Thermus thermophilus HB8 (strain: HB8, type-material: type strain of Thermus thermophilus)
    Lineage
    Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus
    Old locus tag
    TTHA0198
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_006461.1 (193335..193946, complement)

    Chromosome 1 - NC_006461.1Genomic Context describing neighboring genes Neighboring gene TRAP transporter substrate-binding protein Neighboring gene DUF4384 domain-containing protein Neighboring gene polyhydroxybutyrate depolymerase Neighboring gene molybdopterin oxidoreductase family protein Neighboring gene YifB family Mg chelatase-like AAA ATPase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006461.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Junction ribonuclease: a ribonuclease HII orthologue from Thermus thermophilus HB8 prefers the RNA-DNA junction to the RNA/DNA heteroduplex. Ohtani N, et al. Biochem J, 2008 Jun 15. PMID 18318663

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. When oligomeric RNA-DNA/DNAs were used as a mimic substrate for Okazaki fragments, however, TTHA0198 cleaved them only at the 5' side of the last ribonucleotide at the RNA-DNA junction.
      Title: Junction ribonuclease: a ribonuclease HII orthologue from Thermus thermophilus HB8 prefers the RNA-DNA junction to the RNA/DNA heteroduplex.
    Submit: New GeneRIF Correction

    General protein information

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    Preferred Names
    ribonuclease HII
    WP_011227771.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006461.1 Reference assembly

      Range
      193335..193946 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011227771.1 MULTISPECIES: ribonuclease HII [Thermus]

      See identical proteins and their annotated locations for WP_011227771.1

      UniProtKB/Swiss-Prot
      Q5SLU5
      UniProtKB/TrEMBL
      A0A3P4AS18, F6DIA1, H9ZP61
      Conserved Domains (1) summary
      PRK13926
      Location:1 → 193
      PRK13926; ribonuclease HII; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5SLU5.1